Gene: HCP5
Alternate names for this Gene:
Gene Summary:
Gene is located in Chromosome:
Location in Chromosome :
Description of this Gene:
Type of Gene:
rs2248372 in
HCP5 gene and
ACQUIRED IMMUNODEFICIENCY SYNDROME, PROGRESSION TO
PMID 20041166 2009 Common genetic variation and the control of HIV-1 in humans.
PMID 21051598 2010 The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.
rs2248372 in
HCP5 gene and
AIDS, PROGRESSION TO
PMID 20041166 2009 Common genetic variation and the control of HIV-1 in humans.
PMID 21051598 2010 The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.
rs2284178 in
HCP5 gene and
Acquired Immunodeficiency Syndrome
PMID 19115949 2009 Genomewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS Genomewide Association Study 02).
rs3131643 in
HCP5 gene and
Blood basophil count (lab test)
PMID 27863252 2016 The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease.
rs9281492 in
HCP5 gene and
Body Height
PMID 28552196 2017 Whole-Genome Sequencing Coupled to Imputation Discovers Genetic Signals for Anthropometric Traits.
rs116822326 in
HCP5 gene and
Carcinoma of lung
PMID 28604730 2017 Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes.
rs2395029 in
HCP5 gene and
Chemical and Drug Induced Liver Injury
PMID 19483685 2009 HLA-B*5701 genotype is a major determinant of drug-induced liver injury due to flucloxacillin.
PMID 30661239 2019 Drug-Induced Liver Injury due to Flucloxacillin: Relevance of Multiple Human Leukocyte Antigen Alleles.
rs114277634 in
HCP5 gene and
Child Development Disorders, Pervasive
PMID 28540026 2017 Meta-analysis of GWAS of over 16,000 individuals with autism spectrum disorder highlights a novel locus at 10q24.32 and a significant overlap with schizophrenia.
rs6940467 in
HCP5 gene and
Coronary heart disease
PMID 21971053 2012 Genome-wide association study of coronary artery disease in the Japanese.
rs2248373 in
HCP5 gene and
Corpuscular Hemoglobin Concentration Mean
PMID 23222517 2012 Seventy-five genetic loci influencing the human red blood cell.
rs12660382 in
HCP5 gene and
Diabetes Mellitus, Insulin-Dependent
PMID 17632545 2007 A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene.
rs79022003 in
HCP5 gene and
Eosinophil count procedure
PMID 27863252 2016 The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease.
rs2248372 in
HCP5 gene and
HIV-1, RESISTANCE TO
PMID 20041166 2009 Common genetic variation and the control of HIV-1 in humans.
PMID 21051598 2010 The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.
rs2248372 in
HCP5 gene and
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1, SUSCEPTIBILITY TO
PMID 20041166 2009 Common genetic variation and the control of HIV-1 in humans.
PMID 21051598 2010 The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.
rs114864815 in
HCP5 gene and
Herpes zoster disease
PMID 25297839 2015 Genetic variation in the HLA region is associated with susceptibility to herpes zoster.
PMID 30298529 2019 The eMERGE genotype set of 83,717 subjects imputed to ~40 million variants genome wide and association with the herpes zoster medical record phenotype.
rs2395488 in
HCP5 gene and
Lupus Erythematosus, Systemic
PMID 24871463 2014 GWAS identifies novel SLE susceptibility genes and explains the association of the HLA region.
rs3131643 in
HCP5 gene and
Lymphocyte Count measurement
PMID 27863252 2016 The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease.
rs2844507 in
HCP5 gene and
Multiple Sclerosis
PMID 17660530 2007 Risk alleles for multiple sclerosis identified by a genomewide study.
rs114012716 in
HCP5 gene and
Myositis
PMID 26291516 2015 Genome-wide association study identifies HLA 8.1 ancestral haplotype alleles as major genetic risk factors for myositis phenotypes.
rs12660382 in
HCP5 gene and
Pemphigus Vulgaris
PMID 22437316 2012 Population-specific association between a polymorphic variant in ST18, encoding a pro-apoptotic molecule, and pemphigus vulgaris.
rs3094013 in
HCP5 gene and
Physical Activity Measurement
PMID 28448500 2017 Genome-wide physical activity interactions in adiposity - A meta-analysis of 200,452 adults.
rs2523673 in
HCP5 gene and
Platelet Count measurement
PMID 27863252 2016 The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease.
rs3094013 in
HCP5 gene and
Polymyositis
PMID 26362759 2016 Dense genotyping of immune-related loci in idiopathic inflammatory myopathies confirms HLA alleles as the strongest genetic risk factor and suggests different genetic background for major clinical subgroups.
rs2395029 in
HCP5 gene and
Psoriasis
PMID 18369459 2008 However, rs2395029 encoding the G2V polymorphism within the class I gene HCP5 (combined P = 2.13x10(-26) in U.S. cases) yielded the highest ORs with both PS and PSA (4.1 and 3.2 respectively).
rs12660382 in
HCP5 gene and
Rheumatoid Arthritis
PMID 19503088 2009 REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis.
PMID 17804836 2007 TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study.
rs114277634 in
HCP5 gene and
Schizophrenia
PMID 28540026 2017 Meta-analysis of GWAS of over 16,000 individuals with autism spectrum disorder highlights a novel locus at 10q24.32 and a significant overlap with schizophrenia.
rs116822326 in
HCP5 gene and
Squamous cell carcinoma of lung
PMID 28604730 2017 Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes.